| Date | Opponent | Result / Time | Record |
| 11/16/2012 | @ SUNY Oswego Tip-Off Tournament (vs. Medgar Evers) | W, 87-59 | 1-0 |
| 11/17/2012 | @ SUNY Oswego Tip-Off Tournament (Championship vs. Oswego) | L, 59-83 | 1-1 |
| 11/20/2012 | CLARKSON UNIVERSITY | L, 75-78 | 1-2 |
| 11/27/2012 | KEYSTONE COLLEGE | W, 94-90 | 2-2 |
| 11/29/2012 | SUNY ESF | W, 93-34 | 3-2 |
| 12/1/2012 | @ Hartwick College | L, 68-83 | 3-3 |
| 12/5/2012 | @ Keuka College * | L, 50-59 | 3-4, 0-1 NEAC |
| 12/8/2012 | ALFRED UNIVERSITY | W, 77-76 OT | 4-4 |
| 12/15/2012 | HAMILTON COLLEGE | W, 82-66 | 5-4 |
| 1/6/2013 | @ Penn State Abington * | W, 108-79 | 6-4, 1-1 NEAC |
| 1/9/2013 | SUNY IT * | W, 101-71 | 7-4, 2-1 NEAC |
| 1/12/2013 | LANCASTER BIBLE COLLEGE * | W, 72-57 | 8-4, 3-1 NEAC |
| 1/16/2013 | @ SUNY Cobleskill * | W, 75-61 | 9-4, 4-1 NEAC |
| 1/18/2013 | @ SUNY Canton | W, 73-63 | 10-4 |
| 1/20/2013 | PENN STATE BERKS * | W, 89-71 | 11-4, 5-1 NEAC |
| 1/23/2013 | @ Wells College * | W, 71-58 | 12-4, 6-1 NEAC |
| 1/26/2013 | CAZENOVIA COLLEGE * | W, 74-56 | 13-4, 7-1 NEAC |
| 1/30/2013 | KEUKA COLLEGE * | W, 79-69 | 14-4, 8-1 NEAC |
| 2/2/2013 | @ Gallaudet University * | W, 75-56 | 15-4, 9-1 NEAC |
| 2/3/2013 | @ Penn State Harrisburg * | L, 58-70 | 15-5, 9-2 NEAC |
| 2/6/2013 | WELLS COLLEGE * | W, 77-65 | 16-5, 10-2 NEAC |
| 2/9/2013 | @ Cazenovia College * | W, 63-58 | 17-5, 11-2 NEAC |
| 2/12/2013 | SUNY COBLESKILL * | W, 106-69 | 18-5, 12-2 NEAC |
| 2/16/2013 | @ SUNY IT * | W, 96-75 | 19-5, 13-2 NEAC |
| 2/23/2013 | NEAC Men's Basketball Championship Tournament Semi-finals (Morrisville State vs. Penn State Harrisburg - held at Morrisville State) | W, 66-40 | 20-5 |
| 2/23/2013 | NEAC Men's Basketball Championship Tournament Semi-finals (Wells College vs. Penn State Berks - held at Morrisville State) | Wells, 82-61 | - |
| 2/24/2013 | NEAC Men's Basketball Championship Tournament Finals (Morrisville State vs. Wells College - held at Morrisville State) | W, 74-72 | 21-5 |
| 3/2/2013 | NCAA Men's Basketball Championship Tournament (at Ramapo - held at Nyack College) | W, 86-78 | 22-5 |
| 3/9/2013 | NCAA Men's Basketball Championship Tournament - Second Round (held at Rhode Island College) | W, 66-61 OT | 23-5 |
| 3/16/2013 | NCAA Championship Tournament - Sectionals / Sweet 16 (at St. Mary's (Md.)) | L, 66-84 | 23-6 |